# Copyright (C) 2021 - 2022 Advanced Micro Devices, Inc. All rights reserved. # # Permission is hereby granted, free of charge, to any person obtaining a copy # of this software and associated documentation files (the "Software"), to deal # in the Software without restriction, including without limitation the rights # to use, copy, modify, merge, publish, distribute, sublicense, and/or sell # copies of the Software, and to permit persons to whom the Software is # furnished to do so, subject to the following conditions: # # The above copyright notice and this permission notice shall be included in # all copies or substantial portions of the Software. # # THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR # IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, # FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE # AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER # LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN # THE SOFTWARE. """Performance analysis routines.""" import random import numpy as np import statistics from perflib.utils import Run from dataclasses import dataclass from typing import List def confidence_interval(vals, measure, confidence, alpha=0.95, nboot=2000): """Compute the alpha-confidence interval for the given values using boot-strap resampling.""" if confidence == "bootstrap": medians = [] for iboot in range(nboot): resample = [] for i in range(len(vals)): resample.append(vals[random.randrange(len(vals))]) if measure == "median": medians.append(np.median(resample)) elif measure == "mean": medians.append(np.mean(resample)) medians = sorted(medians) low = medians[int(np.floor(nboot * 0.5 * (1.0 - alpha)))] high = medians[int(np.ceil(nboot * (1.0 - 0.5 * (1.0 - alpha))))] elif confidence == "stdev": mean = np.mean(vals) stdev = np.mean(vals) # NB: assumes alpha \approx 95 low = mean - 2 * stdev high = mean + 2 * stdev else: print("invalid value for confidence:", confidence) import sys sys.exit(1) return low, high def ratio_confidence_interval(Avals, Bvals, alpha=0.95, nboot=2000): """Compute the alpha-confidence interval for the ratio of the given sets of values using boot-strap resampling.""" ratios = [] for i in range(nboot): ratios.append(Avals[random.randrange(len(Avals))] / Bvals[random.randrange(len(Bvals))]) ratios = sorted(ratios) low = ratios[int(np.floor(len(ratios) * 0.5 * (1.0 - alpha)))] high = ratios[int(np.ceil(len(ratios) * (1.0 - 0.5 * (1.0 - alpha))))] return low, high @dataclass class MoodsResult: pval: float medians: List[float] def moods(reference: Run, others: List[Run]): """Perform Moods analysis...""" import scipy.stats import numpy pvals = {} for rname, rdat in reference.dats.items(): for other in others: odat = other.dats[rname] for length in rdat.samples.keys(): s1 = rdat.samples[length].times s2 = odat.samples[length].times if arguments.method == 'median': m1 = statistics.median(s1) m2 = statistics.median(s2) elif arguments.mesaure == "mean": m1 = numpy.mean(s1) m2 = numpy.mean(s2) if arguments.method == 'moods': _, pval, _, _ = scipy.stats.median_test(s1, s2) elif arguments.method == 'ttest': _, pval = scipy.stats.ttest_ind(s1, s2) elif arguments.method == 'mwu': _, pval = scipy.stats.mannwhitneyu(s1, s2) else: print("unsupported statistical method") sys.exit(1) pvals[other.path.name, rname, length] = MoodsResult(pval, [m1, m2]) return pvals