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213 lines
7.2 KiB
Python
213 lines
7.2 KiB
Python
# Copyright (C) 2025 Advanced Micro Devices, Inc. All rights reserved.
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#
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# Permission is hereby granted, free of charge, to any person obtaining a copy
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# of this software and associated documentation files (the "Software"), to deal
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# in the Software without restriction, including without limitation the rights
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# to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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# copies of the Software, and to permit persons to whom the Software is
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# furnished to do so, subject to the following conditions:
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#
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# The above copyright notice and this permission notice shall be included in
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# all copies or substantial portions of the Software.
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#
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# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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# IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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# AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
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# THE SOFTWARE.
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import subprocess, os, sys, datetime
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class sbatchparams:
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def __init__(self):
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self.partition = None
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self.acct = None
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self.nnodes = 1
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self.modules = []
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self.exports = []
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self.ntaskspernode = None
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self.ntasks = None
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self.gpuspernode = None
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self.afterok = []
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self.afterany = []
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self.timelimit = None
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self.wait = False
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class sbatchjob:
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def __init__(self, jobid, outfilename, errfilename):
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self.jobid = jobid
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self.outfilename = outfilename
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self.errfilename = errfilename
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def sbatch(jobname, params, logdir, workdir, jobcmd, verbose=0):
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sbatchcmd = []
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sbatchcmd.append("sbatch")
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batchscript = "#!/bin/bash\n"
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batchscript += "#SBATCH --job-name=" + jobname + "\n"
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outfilename = os.path.join(logdir, "%j", jobname + ".out")
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batchscript += "#SBATCH --output=" + outfilename + "\n"
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errfilename = os.path.join(logdir, "%j", jobname + ".err")
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batchscript += "#SBATCH --error=" + errfilename + "\n"
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if params.partition != None:
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batchscript += "#SBATCH --partition=" + params.partition + "\n"
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batchscript += "#SBATCH --nodes=" + str(params.nnodes) + "\n"
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if params.ntaskspernode != None:
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batchscript += "#SBATCH --ntasks-per-node=" + str(
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params.ntaskspernode) + "\n"
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if params.ntasks != None:
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batchscript += "#SBATCH --ntasks=" + str(params.ntasks) + "\n"
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if params.gpuspernode != None:
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batchscript += "#SBATCH --gpus-per-node=" + str(
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params.gpuspernode) + "\n"
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if params.timelimit != None:
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batchscript += "#SBATCH --time=" + str(params.timelimit) + "\n"
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if params.acct != None:
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batchscript += "#SBATCH --account=" + params.acct + "\n"
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if len(params.afterany) > 0:
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batchscript += "#SBATCH --dependency=afterany:" + ",".join(
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str(x) for x in params.afterany) + "\n"
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if len(params.afterok) > 0:
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batchscript += "#SBATCH --dependency=afterok:" + ",".join(
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str(x) for x in params.afterok) + "\n"
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if len(params.afterany) > 0 or len(params.afterok) > 0:
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batchscript += "#SBATCH --kill-on-invalid-dep=yes\n"
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batchscript += "#SBATCH --exclusive\n"
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for module in params.modules:
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batchscript += "module load " + module + "\n"
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for export in params.exports:
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batchscript += "export " + export + "\n"
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batchscript += "cd " + workdir + "\n"
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batchscript += jobcmd
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if verbose > 0:
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print(verbose)
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print(batchscript)
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p = subprocess.Popen(sbatchcmd,
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stdin=subprocess.PIPE,
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stdout=subprocess.PIPE,
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stderr=subprocess.PIPE)
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for line in batchscript.splitlines():
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byteline = str.encode(line + "\n")
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p.stdin.write(byteline)
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p.stdin.close()
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p.wait()
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if p.returncode == 0:
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outwords = p.stdout.read().decode("utf-8")
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jobid = int(outwords.split()[-1])
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print("queued", jobname, jobid)
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newjob = sbatchjob(jobid, outfilename.replace("%j", str(jobid)),
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errfilename.replace("%j", str(jobid)))
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return newjob
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else:
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print("sbatch failed")
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print(batchscript)
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print(p.stdout.read().decode("utf-8"))
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print(p.stderr.read().decode("utf-8"))
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sys.exit(1)
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return None
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def scancel(job):
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scancelcmd = ["scancel", str(job.jobid)]
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p = subprocess.Popen(scancelcmd)
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p.wait()
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if p.returncode == 0:
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print("cancelled", job.jobid)
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else:
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print("scancel failed")
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sys.exit(1)
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def reportonjobs(params, logdir, jobs, verbose=0):
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jobids = []
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for job in jobs:
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jobids.append(job.jobid)
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batchscript = "#!/bin/bash\n"
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jobname = "report"
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batchscript += "#SBATCH --job-name=" + jobname + "\n"
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batchscript += "#SBATCH --nodes=1\n"
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outfilename = os.path.join(logdir, "%j", jobname + ".out")
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batchscript += "#SBATCH --output=" + outfilename + "\n"
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errfilename = os.path.join(logdir, "%j", jobname + ".err")
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batchscript += "#SBATCH --error=" + errfilename + "\n"
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if params.acct != None:
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batchscript += "#SBATCH --account=" + params.acct + "\n"
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if params.partition != None:
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batchscript += "#SBATCH --partition=" + params.partition + "\n"
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if params.timelimit != None:
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batchscript += "#SBATCH --time=0:5:00\n"
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if params.wait:
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batchscript += "#SBATCH --wait\n"
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# TODO: copy out and err log files to the report working dir.
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# TODO: out and err files, and job name.
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if len(jobids) > 0:
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batchscript += "#SBATCH --dependency=afterany:" + ",".join(
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str(x) for x in jobids) + "\n"
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reportcmd = ""
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for job in jobs:
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joblogdir = os.path.dirname(os.path.realpath(job.outfilename))
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#print(joblogdir)
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reportcmd += "if [ -e " + joblogdir + " ]; then\n"
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reportcmd += "cp -r " + joblogdir + " " + logdir + "/$SLURM_JOB_ID\n"
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reportcmd += "fi\n"
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reportcmd += "sacct -X -j " + ",".join(str(x) for x in jobids) \
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+ " -o JobName,JobID,state,Elapsed,ExitCode\n"
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batchscript += reportcmd + "\n"
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if verbose > 0:
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print(batchscript)
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sbatchcmd = []
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sbatchcmd.append("sbatch")
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p = subprocess.Popen(sbatchcmd,
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stdin=subprocess.PIPE,
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stdout=subprocess.PIPE,
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stderr=subprocess.PIPE)
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for line in batchscript.splitlines():
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byteline = str.encode(line + "\n")
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p.stdin.write(byteline)
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p.stdin.close()
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#reportjob = sbatch("finalreport", params, logdir, workdir, jobcmd, verbose=False):
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p.wait()
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if p.returncode == 0:
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outwords = p.stdout.read().decode("utf-8")
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jobid = int(outwords.split()[-1])
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print("queued report", jobid)
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newjob = sbatchjob(jobid, outfilename.replace("%j", str(jobid)),
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errfilename.replace("%j", str(jobid)))
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return newjob
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else:
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print("sbatch failed")
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print(batchscript)
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print(p.stdout.read().decode("utf-8"))
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print(p.stderr.read().decode("utf-8"))
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sys.exit(1)
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